Get the MD5 hash of big files in Python

You can’t get its md5 without reading the full content. But you can use the update function to read the file’s content block by block.

m.update(a); m.update(b) is equivalent to m.update(a+b).

You need to read the file in chunks of suitable size:

def md5_for_file(f, block_size=2**20):
    md5 = hashlib.md5()
    while True:
        data = f.read(block_size)
        if not data:
            break
        md5.update(data)
    return md5.digest()

Note: Make sure you open your file with the ‘rb’ to the open – otherwise you will get the wrong result.

So to do the whole lot in one method – use something like:

def generate_file_md5(rootdir, filename, blocksize=2**20):
    m = hashlib.md5()
    with open( os.path.join(rootdir, filename) , "rb" ) as f:
        while True:
            buf = f.read(blocksize)
            if not buf:
                break
            m.update( buf )
    return m.hexdigest()

The update above was based on the comments provided by Frerich Raabe – and I tested this and found it to be correct on my Python 2.7.2 Windows installation

I cross-checked the results using the jacksum tool.

jacksum -a md5 <filename>

Python < 3.7

import hashlib

def checksum(filename, hash_factory=hashlib.md5, chunk_num_blocks=128):
    h = hash_factory()
    with open(filename,'rb') as f: 
        for chunk in iter(lambda: f.read(chunk_num_blocks*h.block_size), b''): 
            h.update(chunk)
    return h.digest()

Python 3.8 and above

import hashlib

def checksum(filename, hash_factory=hashlib.md5, chunk_num_blocks=128):
    h = hash_factory()
    with open(filename,'rb') as f: 
        while chunk := f.read(chunk_num_blocks*h.block_size): 
            h.update(chunk)
    return h.digest()

Original post

If you want a more Pythonic (no while True) way of reading the file, check this code:

import hashlib

def checksum_md5(filename):
    md5 = hashlib.md5()
    with open(filename,'rb') as f: 
        for chunk in iter(lambda: f.read(8192), b''): 
            md5.update(chunk)
    return md5.digest()

Note that the iter() function needs an empty byte string for the returned iterator to halt at EOF, since read() returns b'' (not just '').

Here’s my version of Piotr Czapla’s method:

def md5sum(filename):
    md5 = hashlib.md5()
    with open(filename, 'rb') as f:
        for chunk in iter(lambda: f.read(128 * md5.block_size), b''):
            md5.update(chunk)
    return md5.hexdigest()

Using multiple comment/answers for this question, here is my solution:

import hashlib
def md5_for_file(path, block_size=256*128, hr=False):
    '''
    Block size directly depends on the block size of your filesystem
    to avoid performances issues
    Here I have blocks of 4096 octets (Default NTFS)
    '''
    md5 = hashlib.md5()
    with open(path,'rb') as f:
        for chunk in iter(lambda: f.read(block_size), b''):
             md5.update(chunk)
    if hr:
        return md5.hexdigest()
    return md5.digest()

• This is Pythonic
• This is a function
• It avoids implicit values: always prefer explicit ones.
• It allows (very important) performance optimizations

I’m not sure that there isn’t a bit too much fussing around here. I recently had problems with md5 and files stored as blobs in MySQL, so I experimented with various file sizes and the straightforward Python approach, viz:

FileHash = hashlib.md5(FileData).hexdigest()

I couldn’t detect any noticeable performance difference with a range of file sizes 2 KB to 20 MB and therefore no need to ‘chunk’ the hashing. Anyway, if Linux has to go to disk, it will probably do it at least as well as the average programmer’s ability to keep it from doing so. As it happened, the problem was nothing to do with md5. If you’re using MySQL, don’t forget the md5() and sha1() functions already there.

A remix of Bastien Semene’s code that takes the Hawkwing comment about generic hashing function into consideration…

def hash_for_file(path, algorithm=hashlib.algorithms[0], block_size=256*128, human_readable=True):
    """
    Block size directly depends on the block size of your filesystem
    to avoid performances issues
    Here I have blocks of 4096 octets (Default NTFS)

    Linux Ext4 block size
    sudo tune2fs -l /dev/sda5 | grep -i 'block size'
    > Block size:               4096

    Input:
        path: a path
        algorithm: an algorithm in hashlib.algorithms
                   ATM: ('md5', 'sha1', 'sha224', 'sha256', 'sha384', 'sha512')
        block_size: a multiple of 128 corresponding to the block size of your filesystem
        human_readable: switch between digest() or hexdigest() output, default hexdigest()
    Output:
        hash
    """
    if algorithm not in hashlib.algorithms:
        raise NameError('The algorithm "{algorithm}" you specified is '
                        'not a member of "hashlib.algorithms"'.format(algorithm=algorithm))

    hash_algo = hashlib.new(algorithm)  # According to hashlib documentation using new()
                                        # will be slower then calling using named
                                        # constructors, ex.: hashlib.md5()
    with open(path, 'rb') as f:
        for chunk in iter(lambda: f.read(block_size), b''):
             hash_algo.update(chunk)
    if human_readable:
        file_hash = hash_algo.hexdigest()
    else:
        file_hash = hash_algo.digest()
    return file_hash

import hashlib,re
opened = open('/home/parrot/pass.txt','r')
opened = open.readlines()
for i in opened:
    strip1 = i.strip('n')
    hash_object = hashlib.md5(strip1.encode())
    hash2 = hash_object.hexdigest()
    print hash2

Implementation of Yuval Adam’s answer for Django:

import hashlib
from django.db import models

class MyModel(models.Model):
    file = models.FileField()  # Any field based on django.core.files.File

    def get_hash(self):
        hash = hashlib.md5()
        for chunk in self.file.chunks(chunk_size=8192):
            hash.update(chunk)
        return hash.hexdigest()

A Python 2/3 portable solution

To calculate a checksum (md5, sha1, etc.), you must open the file in binary mode, because you’ll sum bytes values:

To be Python 2.7 and Python 3 portable, you ought to use the io packages, like this:

import hashlib
import io


def md5sum(src):
    md5 = hashlib.md5()
    with io.open(src, mode="rb") as fd:
        content = fd.read()
        md5.update(content)
    return md5

If your files are big, you may prefer to read the file by chunks to avoid storing the whole file content in memory:

def md5sum(src, length=io.DEFAULT_BUFFER_SIZE):
    md5 = hashlib.md5()
    with io.open(src, mode="rb") as fd:
        for chunk in iter(lambda: fd.read(length), b''):
            md5.update(chunk)
    return md5

The trick here is to use the iter() function with a sentinel (the empty string).

The iterator created in this case will call o [the lambda function] with no arguments for each call to its next() method; if the value returned is equal to sentinel, StopIteration will be raised, otherwise the value will be returned.

If your files are really big, you may also need to display progress information. You can do that by calling a callback function which prints or logs the amount of calculated bytes:

def md5sum(src, callback, length=io.DEFAULT_BUFFER_SIZE):
    calculated = 0
    md5 = hashlib.md5()
    with io.open(src, mode="rb") as fd:
        for chunk in iter(lambda: fd.read(length), b''):
            md5.update(chunk)
            calculated += len(chunk)
            callback(calculated)
    return md5

I think the following code is more Pythonic:

from hashlib import md5

def get_md5(fname):
    m = md5()
    with open(fname, 'rb') as fp:
        for chunk in fp:
            m.update(chunk)
    return m.hexdigest()

I don’t like loops. Based on Nathan Feger’s answer:

md5 = hashlib.md5()
with open(filename, 'rb') as f:
    functools.reduce(lambda _, c: md5.update(c), iter(lambda: f.read(md5.block_size * 128), b''), None)
md5.hexdigest()