Plot with low resolution curves Question: My problem requirement is to redraw a graph with curves at low resolution. As shown below: Is there a way to do it with matplotlib library or any image processing solution? Currently matplotlib is producing lines with very high smoothness as shown below: Here is the drawing function I …
Averaging numeric values of all files for three different folders using Python Question: I am trying to average the numeric values in the file for each var. It works fine for var_values=1.0 but it is not working for var_values=5.0,10.0. I present the current output. The expected output should have numeric values for var_values=5.0,10.0 as each …
Read .csv file with columns of varying length as dictionary in Python Question: How do I read in a .csv file in Python with columns of varying lengths? I want to create a dictionary from the .csv file, with the .csv columns as lists of dictionary values. I’ve figured out how to write the dictionary …
Refactoring pandas using an iterator via chunksize Question: I am looking for advice on using a pandas iterator. I performed a parsing operation using Python pandas, the size of the input files (a bioinformatics program called eggNOG) is resulting in ‘RAM bottleneck’ phenomenon. It’s just not processing the file. The obvious solution is to shift …
creating a .csv from a combination of strings and panas dfs Question: my .csv with multiple blocks need to follow this format (1 block sample): so trying to do it in pandas and then write to csv. The problem is those comments above each of the two sections(outside the dataframes). Here is sample code: import …
Is there a Python module to handle csv files with sections? Question: I’m seeing more and more csv files containing multiple sections, each containing their own table. For instance this file from 10XGenomics: [gene-expression] reference,/path/to/transcriptome [libraries] fastq_id,fastqs,feature_types gex1,/path/to/fastqs,Gene Expression mux1,/path/to/fastqs,Multiplexing Capture [samples] sample_id,cmo_ids sample1,CMO301 sample2,CMO303 Sometimes the section headers are even embedded in their own …
traversing the multi index dictionaries which is present in dataframe & store the values in a list Question: The above link contains the data frame, it has 2 columns [CREATEDAT, RESPONSE], the objective is to traverse the response column and in that response column there is an estimate key, in that key, I have to …
Filtering a DataFrame by comparing to another DataFrame Question: I’m very new to using Python, and have been working on a script that will allow me to download a csv, clean the data and create an output file that can be imported correctly into a shopify store. So far, I’ve managed to accomplish this, generating …
Create a dictionary from a csv file where a specific column is the key and the rows are the values in Python Question: I have a csv file formatted as below: jersey number, position, name, birth_date, birth_city, years_in_nba, team 23 , SF , Lebron, 12/30/84 , Akron , 19 , Lakers 30 , PG , …
How to use Arduino to fetch values output by Python script? Question: I have a GUI that was created using the PySimpleGUI package in Python. Based on user selection from a dropdown menu, the script writes 4 integers to a csv file. (For example, the user selects option A, and the script writes (20, 30, …
