Python does not see pygraphviz
Question:
I have installed pygraphviz using easy_install
But when i launch python i have an error:
>>>import pygraphviz as pgv
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
ImportError: No module named pygraphviz
>>>
Using Ubuntu 12.04 and gnome-terminal.
Answers:
Assuming that you’re on Ubuntu please look at following steps
sudo apt-get install graphviz libgraphviz-dev pkg-config- Create and activate virtualenv if needed. The commands looks something like
sudo apt-get install python-pip python-virtualenv
- Run
pip install pygraphviz
- Run terminal and check by importing and see if it works
The quick and easy solution is:
sudo apt-get install -y python-pygraphviz
using pip will also work, but make sure you have graphviz, libgraphviz-dev, and pkg-config already installed.
sudo apt-get install -y graphviz libgraphviz-dev pkg-config python-pip
sudo pip install pygraphviz
Under Ubuntu 15.10+ (ie 2015ish Debian), the quick and easy solution is:
sudo apt-get install python-pygraphviz
Any dependencies are properly pulled by apt.
On Mac OSX, the following did the trick for me:
pip install graphviz
pip install cgraph
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig
cd /usr/local/include/graphviz
sudo ln -s . graphviz
pip install pygraphviz
[As suggested, fixed typo from previously /urs/local/ to /usr/local/]
On Mac OSX El Capitan, Bart Theeten’s solution works but there are two things you need to be careful. Initially, make sure that you installed graphviz on your computer. You can use homebrew:
brew install graphviz
Other thing is to make sure you add the path of packages to PYTHONPATH
export PYTHONPATH=$PYTHONPATH:/usr/local/lib/python2.7/site-packages/
On Ubuntu 14.04, there is a problem in auto detecting graphviz library and include files. If you follow the steps below probably you’ll be safe.
1) sudo apt-get install graphviz libgraphviz-dev pkg-config python-pip
2) pip install pygraphviz --install-option="--include-path=/usr/include/graphviz" --install-option="--library-path=/usr/lib/graphviz/"
In Colab,
!apt install libgraphviz - dev
!pip install pygraphviz
Credits: https://gist.github.com/korakot/a80c04a1945b06e2f4a053f92fecfbf9
I use mac m1, I fix this by this.
#install graphviz first
brew install graphviz
#check your graphviz path
brew info graphviz
#change to your dir
export GRAPHVIZ_DIR="/usr/local/Cellar/graphviz/<VERSION>" #3.0.0 in my case
#finally run this
pip install pygraphviz --global-option=build_ext --global-option="-I$GRAPHVIZ_DIR/include" --global-option="-L$GRAPHVIZ_DIR/lib"
I have installed pygraphviz using easy_install
But when i launch python i have an error:
>>>import pygraphviz as pgv
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
ImportError: No module named pygraphviz
>>>
Using Ubuntu 12.04 and gnome-terminal.
Assuming that you’re on Ubuntu please look at following steps
sudo apt-get install graphviz libgraphviz-dev pkg-config- Create and activate virtualenv if needed. The commands looks something like
sudo apt-get install python-pip python-virtualenv - Run
pip install pygraphviz - Run terminal and check by importing and see if it works
The quick and easy solution is:
sudo apt-get install -y python-pygraphviz
using pip will also work, but make sure you have graphviz, libgraphviz-dev, and pkg-config already installed.
sudo apt-get install -y graphviz libgraphviz-dev pkg-config python-pip
sudo pip install pygraphviz
Under Ubuntu 15.10+ (ie 2015ish Debian), the quick and easy solution is:
sudo apt-get install python-pygraphviz
Any dependencies are properly pulled by apt.
On Mac OSX, the following did the trick for me:
pip install graphviz
pip install cgraph
export PKG_CONFIG_PATH=/usr/local/lib/pkgconfig
cd /usr/local/include/graphviz
sudo ln -s . graphviz
pip install pygraphviz
[As suggested, fixed typo from previously /urs/local/ to /usr/local/]
On Mac OSX El Capitan, Bart Theeten’s solution works but there are two things you need to be careful. Initially, make sure that you installed graphviz on your computer. You can use homebrew:
brew install graphviz
Other thing is to make sure you add the path of packages to PYTHONPATH
export PYTHONPATH=$PYTHONPATH:/usr/local/lib/python2.7/site-packages/
On Ubuntu 14.04, there is a problem in auto detecting graphviz library and include files. If you follow the steps below probably you’ll be safe.
1) sudo apt-get install graphviz libgraphviz-dev pkg-config python-pip
2) pip install pygraphviz --install-option="--include-path=/usr/include/graphviz" --install-option="--library-path=/usr/lib/graphviz/"
In Colab,
!apt install libgraphviz - dev
!pip install pygraphviz
Credits: https://gist.github.com/korakot/a80c04a1945b06e2f4a053f92fecfbf9
I use mac m1, I fix this by this.
#install graphviz first
brew install graphviz
#check your graphviz path
brew info graphviz
#change to your dir
export GRAPHVIZ_DIR="/usr/local/Cellar/graphviz/<VERSION>" #3.0.0 in my case
#finally run this
pip install pygraphviz --global-option=build_ext --global-option="-I$GRAPHVIZ_DIR/include" --global-option="-L$GRAPHVIZ_DIR/lib"