Efficient expanding OLS in pandas

Question

I would like to explore the solutions of performing expanding OLS in pandas (or other libraries that accept DataFrame/Series friendly) efficiently.

Assumming the dataset is large, I am NOT interested in any solutions with a for-loop;
I am looking for solutions about expanding rather than rolling. Rolling functions always require a fixed window while expanding uses a variable window (starting from beginning);
Please do not suggest pandas.stats.ols.MovingOLS because it is deprecated;
Please do not suggest other deprecated methods such as expanding_mean.

For example, there is a DataFrame df with two columns X and y. To make it simpler, let’s just calculate beta.
Currently, I am thinking about something like

import numpy as np
import pandas as pd
import statsmodels.api as sm

def my_OLS_func(df, y_name, X_name):
  y = df[y_name]
  X = df[X_name]
  X = sm.add_constant(X)
  b = np.linalg.pinv(X.T.dot(X)).dot(X.T).dot(y)
  return b

df = pd.DataFrame({'X':[1,2.5,3], 'y':[4,5,6.3]})

df['beta'] = df.expanding().apply(my_OLS_func, args = ('y', 'X'))

Expected values of df['beta'] are 0 (or NaN), 0.66666667, and 1.038462.

However, this method does not seem to work because the method seems very inflexible. I am not sure how one could pass the two Series as arguments.
Any suggestions would be appreciated.

Asked By: Yi Bao

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Source

Answer 1

One option is to use the RecursiveLS (recursive least squares) model from Statsmodels:

# Simulate some data
rs = np.random.RandomState(seed=12345)

nobs = 100000
beta = [10., -0.2]
sigma2 = 2.5

exog = sm.add_constant(rs.uniform(size=nobs))
eps = rs.normal(scale=sigma2**0.5, size=nobs)
endog = np.dot(exog, beta) + eps

# Construct and fit the recursive least squares model
mod = sm.RecursiveLS(endog, exog)
res = mod.fit()
# This is a 2 x 100,000 numpy array with the regression coefficients
# that would be estimated when using data from the beginning of the
# sample to each point. You should usually ignore the first k=2
# datapoints since they are controlled by a diffuse prior.
res.recursive_coefficients.filtered

Answered By: cfulton

Answer 2

This is now part of statsmodels

Answered By: jason m

Efficient expanding OLS in pandas

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