How to plot errorbars on seaborn barplot

Question

I have the following dataframe:

data = {'Value':[6.25, 4.55, 4.74, 1.36, 2.56, 1.4, 3.55, 3.21, 3.2, 3.65, 3.45, 3.86, 13.9, 10.3, 15], 
        'Name':['Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke'],
        'Param': ['Param1', 'Param1', 'Param1', 
                 'Param2', 'Param2', 'Param2', 
                 'Param3', 'Param3', 'Param3', 
                 'Param4', 'Param4', 'Param4',
                 'Param5', 'Param5', 'Param5'],
        'error': [2.55, 1.24, 0, 0.04, 0.97, 0, 0.87, 0.7, 0, 0.73, 0.62, 0, 0, 0, 0]}
df = pd.DataFrame(data)

I’d like to add errorbars (pre-defined in the error column) to the bar plot, but I can’t seem to get the x-coordinates right? It shows errorbars for Param5 but there are no errors for Param5? Also for Luke, there are no errors, but in Param1 an errorbar is plotted.

plt.figure()
ax = sns.barplot(x = 'Param', y = 'Value', data = df, hue = 'Name', palette = sns.color_palette('CMRmap_r', n_colors = 3))
x_coords = [p.get_x() + 0.5*p.get_width() for p in ax.patches]
y_coords = [p.get_height() for p in ax.patches]
plt.errorbar(x=x_coords, y=y_coords, yerr=df["error"], fmt="none", c= "k")

Asked By: JonnDough

||

Source

Answer 1

The bars in ax.patches come ordered by hue value. To get the bars and the dataframe in the same order, the dataframe could be sorted first by Name and then by Param:

from matplotlib import pyplot as plt
import seaborn as sns
import pandas as pd

data = {'Value': [6.25, 4.55, 4.74, 1.36, 2.56, 1.4, 3.55, 3.21, 3.2, 3.65, 3.45, 3.86, 13.9, 10.3, 15],
        'Name': ['Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke',
                 'Peter', 'Anna', 'Luke'],
        'Param': ['Param1', 'Param1', 'Param1',
                  'Param2', 'Param2', 'Param2',
                  'Param3', 'Param3', 'Param3',
                  'Param4', 'Param4', 'Param4',
                  'Param5', 'Param5', 'Param5'],
        'error': [2.55, 1.24, 0, 0.04, 0.97, 0, 0.87, 0.7, 0, 0.73, 0.62, 0, 0, 0, 0]}
df = pd.DataFrame(data)
df = df.sort_values(['Name', 'Param'])

plt.figure(figsize=(8, 5))
ax = sns.barplot(x='Param', y='Value', data=df, hue='Name', palette='CMRmap_r')
x_coords = [p.get_x() + 0.5 * p.get_width() for p in ax.patches]
y_coords = [p.get_height() for p in ax.patches]
ax.errorbar(x=x_coords, y=y_coords, yerr=df["error"], fmt="none", c="k")
plt.show()

PS: Note that by default, the columns are sorted alphabetically. If you want to maintain the original order, you can make the column categorical via pd.Categorical(df['Name'], df['Name'].unique()).

df = pd.DataFrame(data)
df['Name'] = pd.Categorical(df['Name'], df['Name'].unique())
df['Param'] = pd.Categorical(df['Param'], df['Param'].unique())
df = df.sort_values(['Name', 'Param'])

Answered By: JohanC

How to plot errorbars on seaborn barplot

Question:

Answers: