Test an examples directory for a Python project
Question:
I have a project for developing a Python package where the structure of the project is similar to the following:
myproject/
├── README.md
├── examples/
│ ├── ex1.py
│ └── ex2.py
├── pyproject.toml
├── src/
│ └── mypackage/
│ ├── __init__.py
│ ├── adder.py
│ └── divider.py
└── tests/
├── test_adder.py
├── test_divider.py
└── test_examples.py
The project is for developing a Python package named mypackage
which is located in the src
directory. The package is uploaded to PyPI where users can pip install
it. Tests for the package are run with pytest and are located in the tests
directory. Examples of using the package are in the examples
directory. The examples are just scripts as shown below for ex1.py
"""
Example 1
"""
from mypackage import adder
x = 2.5
y = 8
a = adder(x, y)
print('a is', a)
The purpose of test_examples.py
is to test the example files, its contents are shown below:
from examples import ex1
from examples import ex2
def test_ex1():
ex1
def test_ex2():
ex2
When I run pytest in the myproject
directory I get the error shown here:
$ cd myproject
$ pytest
platform darwin -- Python 3.10.6, pytest-7.1.2, pluggy-1.0.0
rootdir: /Users/gavinw/Desktop/test-examples
collected 2 items / 1 error
================================================================== ERRORS ==================================================================
_________________________________________________ ERROR collecting tests/test_examples.py __________________________________________________
ImportError while importing test module '/Users/gavinw/Desktop/test-examples/tests/test_examples.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/opt/miniconda3/envs/ztest/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
tests/test_examples.py:1: in <module>
from examples import ex1
E ModuleNotFoundError: No module named 'examples'
========================================================= short test summary info ==========================================================
ERROR tests/test_examples.py
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
============================================================= 1 error in 0.05s =============================================================
It looks like pytest is not able to run the files in the examples directory because the location does not allow them to be imported. Any suggestions on how I can test the example files? Should I even use pytest for testing examples or is there a different testing tool for this?
Answers:
You should ensure that the examples directory contains __init__.py
so it can be imported correctly.
If that is not enough, you can use PYTHONPATH
:
PYTHONPATH="/path/to/your/code/project/:/path/to/your/code/project/examples" pytest
PYTHONPATH
might be tricky, see https://stackoverflow.com/a/4580120/3800552 and https://stackoverflow.com/a/39682723/3800552 for some usage examples.
There are two approaches that fix the problem. The first approach is to run pytest using the following command:
python -m pytest
The second approach is to add the project directory in the pyproject.toml
file using the pythonpath
setting as shown below. Then just use the pytest
command to run the tests.
[tool.pytest.ini_options]
pythonpath = ["."]
I have a project for developing a Python package where the structure of the project is similar to the following:
myproject/
├── README.md
├── examples/
│ ├── ex1.py
│ └── ex2.py
├── pyproject.toml
├── src/
│ └── mypackage/
│ ├── __init__.py
│ ├── adder.py
│ └── divider.py
└── tests/
├── test_adder.py
├── test_divider.py
└── test_examples.py
The project is for developing a Python package named mypackage
which is located in the src
directory. The package is uploaded to PyPI where users can pip install
it. Tests for the package are run with pytest and are located in the tests
directory. Examples of using the package are in the examples
directory. The examples are just scripts as shown below for ex1.py
"""
Example 1
"""
from mypackage import adder
x = 2.5
y = 8
a = adder(x, y)
print('a is', a)
The purpose of test_examples.py
is to test the example files, its contents are shown below:
from examples import ex1
from examples import ex2
def test_ex1():
ex1
def test_ex2():
ex2
When I run pytest in the myproject
directory I get the error shown here:
$ cd myproject
$ pytest
platform darwin -- Python 3.10.6, pytest-7.1.2, pluggy-1.0.0
rootdir: /Users/gavinw/Desktop/test-examples
collected 2 items / 1 error
================================================================== ERRORS ==================================================================
_________________________________________________ ERROR collecting tests/test_examples.py __________________________________________________
ImportError while importing test module '/Users/gavinw/Desktop/test-examples/tests/test_examples.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
/opt/miniconda3/envs/ztest/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
tests/test_examples.py:1: in <module>
from examples import ex1
E ModuleNotFoundError: No module named 'examples'
========================================================= short test summary info ==========================================================
ERROR tests/test_examples.py
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Interrupted: 1 error during collection !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
============================================================= 1 error in 0.05s =============================================================
It looks like pytest is not able to run the files in the examples directory because the location does not allow them to be imported. Any suggestions on how I can test the example files? Should I even use pytest for testing examples or is there a different testing tool for this?
You should ensure that the examples directory contains __init__.py
so it can be imported correctly.
If that is not enough, you can use PYTHONPATH
:
PYTHONPATH="/path/to/your/code/project/:/path/to/your/code/project/examples" pytest
PYTHONPATH
might be tricky, see https://stackoverflow.com/a/4580120/3800552 and https://stackoverflow.com/a/39682723/3800552 for some usage examples.
There are two approaches that fix the problem. The first approach is to run pytest using the following command:
python -m pytest
The second approach is to add the project directory in the pyproject.toml
file using the pythonpath
setting as shown below. Then just use the pytest
command to run the tests.
[tool.pytest.ini_options]
pythonpath = ["."]