How to plot groups of line plots from multiple files

Question

I have two files one.txt and two.txt which contains two columns and three rows as

A.txt

and B.txt as

I want to create a two list by importing the value from each column of both files such that

list1 = [[1994, 1996, 1998], [1995,1997,1999]]
list2 =[[4,8,10] , [14, 18, 12]]

and then plot the figure using matplotlib in single figure from both list1 and list2 to compare the figure.

#To create a list of files inside directory I did this
import os
cwd = os.getcwd()

# list to store files
res = []
# Iterate directory
for file in os.listdir(cwd):
    # check only text files
    if file.endswith('.txt'):
        res.append(file)

#then to create a two list from each file i did this
nxyear = []
nxdata = []

myyear = []
mydata = []

for fin in res:
   print(fin)

   GNSS = fin[0:4]    # station name, e.g., UH01
   ts_enu = []
   ts_enu = pd.read_csv (fin, header=0, delim_whitespace=True)
   year = ts_enu.iloc[:,0]    # year
   dis = ts_enu.iloc[:,1]     # NS
   myyear = []
   mydata = []
   myyear.append(year)
   mydata.append(dis)

nxyear.append(myyear)
plt.plot(myyear,mydata)
plt.show()

But it’s not working to get same output as I want. Any help is highly appreciated.

Asked By: mark22

||

Source

Answer 1

I assume that you want to plot each value A of all text files in a single plot.

However, I don’t understand "to compare the figure". With what?

Your code is quite over-complicated. However, here is a working version based on your script. (For another version see below.)

import os
import pandas as pd
import matplotlib.pyplot as plt

cwd = os.getcwd()

files = []

for file in os.listdir(cwd):
    if file.endswith('.txt'):
        files.append(file)

# collect years and values (unnecessary step, see script example below)
years = []
values = []

for file in files:

    df = pd.read_csv(file, header=0, delim_whitespace=True)

    # add years and values to a list
    # better use pd.concat, see script example below
    years.append(df["A"].tolist())
    values.append(df["B"].tolist())

plt.plot(years, values, "o")  # <-- add "o" for circle marker
plt.show()

If you want to clean up your code, here is a suggestion using Path and Pandas, and avoiding using unnecessary lists:

import pandas as pd
import matplotlib.pyplot as plt
from pathlib import Path

# retrieve all text files from the working directory
files = Path.cwd().glob("*.txt")

# load all dataframes
dataframes = (pd.read_csv(file, header=0, delim_whitespace=True) for file in files)

# concat dataframes to one dataframe
data = pd.concat(dataframes, ignore_index=True)

# plot figure
plt.plot(data["A"], data["B"], "o")
plt.show()

Output:

Answered By: Thomas

How to plot groups of line plots from multiple files

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