Converting numpy dtypes to native python types

Question:

If I have a numpy dtype, how do I automatically convert it to its closest python data type? For example,

numpy.float32 -> "python float"
numpy.float64 -> "python float"
numpy.uint32  -> "python int"
numpy.int16   -> "python int"

I could try to come up with a mapping of all of these cases, but does numpy provide some automatic way of converting its dtypes into the closest possible native python types? This mapping need not be exhaustive, but it should convert the common dtypes that have a close python analog. I think this already happens somewhere in numpy.

Asked By: conradlee

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Answers:

How about:

In [51]: dict([(d, type(np.zeros(1,d).tolist()[0])) for d in (np.float32,np.float64,np.uint32, np.int16)])
Out[51]: 
{<type 'numpy.int16'>: <type 'int'>,
 <type 'numpy.uint32'>: <type 'long'>,
 <type 'numpy.float32'>: <type 'float'>,
 <type 'numpy.float64'>: <type 'float'>}
Answered By: unutbu

I think you can just write general type convert function like so:

import numpy as np

def get_type_convert(np_type):
   convert_type = type(np.zeros(1,np_type).tolist()[0])
   return (np_type, convert_type)

print get_type_convert(np.float32)
>> (<type 'numpy.float32'>, <type 'float'>)

print get_type_convert(np.float64)
>> (<type 'numpy.float64'>, <type 'float'>)

This means there is no fixed lists and your code will scale with more types.

Answered By: Matt Alcock

Use val.item() to convert most NumPy values to a native Python type:

import numpy as np

# for example, numpy.float32 -> python float
val = np.float32(0)
pyval = val.item()
print(type(pyval))         # <class 'float'>

# and similar...
type(np.float64(0).item()) # <class 'float'>
type(np.uint32(0).item())  # <class 'int'>
type(np.int16(0).item())   # <class 'int'>
type(np.cfloat(0).item())  # <class 'complex'>
type(np.datetime64(0, 'D').item())  # <class 'datetime.date'>
type(np.datetime64('2001-01-01 00:00:00').item())  # <class 'datetime.datetime'>
type(np.timedelta64(0, 'D').item()) # <class 'datetime.timedelta'>
...

(Another method is np.asscalar(val), however it is deprecated since NumPy 1.16).


For the curious, to build a table of conversions of NumPy array scalars for your system:

for name in dir(np):
    obj = getattr(np, name)
    if hasattr(obj, 'dtype'):
        try:
            if 'time' in name:
                npn = obj(0, 'D')
            else:
                npn = obj(0)
            nat = npn.item()
            print('{0} ({1!r}) -> {2}'.format(name, npn.dtype.char, type(nat)))
        except:
            pass

There are a few NumPy types that have no native Python equivalent on some systems, including: clongdouble, clongfloat, complex192, complex256, float128, longcomplex, longdouble and longfloat. These need to be converted to their nearest NumPy equivalent before using .item().

Answered By: Mike T

found myself having mixed set of numpy types and standard python. as all numpy types derive from numpy.generic, here’s how you can convert everything to python standard types:

if isinstance(obj, numpy.generic):
    return numpy.asscalar(obj)
Answered By: tm_lv

You can also call the item() method of the object you want to convert:

>>> from numpy import float32, uint32
>>> type(float32(0).item())
<type 'float'>
>>> type(uint32(0).item())
<type 'long'>
Answered By: Aryeh Leib Taurog

numpy holds that information in a mapping exposed as typeDict so you could do something like the below::

>>> import __builtin__ as builtins  # if python2
>>> import builtins                 # if python3

Then::

>>> import numpy as np
>>> {v: k for k, v in np.typeDict.items() if k in dir(builtins)}
{numpy.object_: 'object',
 numpy.bool_: 'bool',
 numpy.string_: 'str',
 numpy.unicode_: 'unicode',
 numpy.int64: 'int',
 numpy.float64: 'float',
 numpy.complex128: 'complex'}

If you want the actual python types rather than their names, you can do ::

>>> {v: getattr(builtins, k) for k, v in np.typeDict.items() if k in vars(builtins)}
{numpy.object_: object,
 numpy.bool_: bool,
 numpy.string_: str,
 numpy.unicode_: unicode,
 numpy.int64: int,
 numpy.float64: float,
 numpy.complex128: complex}
Answered By: Meitham

If you want to convert (numpy.array OR numpy scalar OR native type OR numpy.darray) TO native type you can simply do :

converted_value = getattr(value, "tolist", lambda: value)()

tolist will convert your scalar or array to python native type. The default lambda function takes care of the case where value is already native.

Answered By: v.thorey

tolist() is a more general approach to accomplish this. It works in any primitive dtype and also in arrays or matrices.

I doesn’t actually yields a list if called from primitive types:

numpy == 1.15.2

>>> import numpy as np

>>> np_float = np.float64(1.23)
>>> print(type(np_float), np_float)
<class 'numpy.float64'> 1.23

>>> listed_np_float = np_float.tolist()
>>> print(type(listed_np_float), listed_np_float)
<class 'float'> 1.23

>>> np_array = np.array([[1,2,3.], [4,5,6.]])
>>> print(type(np_array), np_array)
<class 'numpy.ndarray'> [[1. 2. 3.]
 [4. 5. 6.]]

>>> listed_np_array = np_array.tolist()
>>> print(type(listed_np_array), listed_np_array)
<class 'list'> [[1.0, 2.0, 3.0], [4.0, 5.0, 6.0]]
Answered By: Carlos Santos

Translate the whole ndarray instead one unit data object:

def trans(data):
"""
translate numpy.int/float into python native data type
"""
result = []
for i in data.index:
    # i = data.index[0]
    d0 = data.iloc[i].values
    d = []
    for j in d0:
        if 'int' in str(type(j)):
            res = j.item() if 'item' in dir(j) else j
        elif 'float' in str(type(j)):
            res = j.item() if 'item' in dir(j) else j
        else:
            res = j
        d.append(res)
    d = tuple(d)
    result.append(d)
result = tuple(result)
return result

However, it takes some minutes when handling large dataframes. I am also looking for a more efficient solution.
Hope a better answer.

Answered By: Qinhong Ma

Sorry to come late to the partly, but I was looking at a problem of converting numpy.float64 to regular Python float only. I saw 3 ways of doing that:

  1. npValue.item()
  2. npValue.astype(float)
  3. float(npValue)

Here are the relevant timings from IPython:

In [1]: import numpy as np

In [2]: aa = np.random.uniform(0, 1, 1000000)

In [3]: %timeit map(float, aa)
10 loops, best of 3: 117 ms per loop

In [4]: %timeit map(lambda x: x.astype(float), aa)
1 loop, best of 3: 780 ms per loop

In [5]: %timeit map(lambda x: x.item(), aa)
1 loop, best of 3: 475 ms per loop

It sounds like float(npValue) seems much faster.

Answered By: gt6989b

My approach is a bit forceful, but seems to play nice for all cases:

def type_np2py(dtype=None, arr=None):
    '''Return the closest python type for a given numpy dtype'''

    if ((dtype is None and arr is None) or
        (dtype is not None and arr is not None)):
        raise ValueError(
            "Provide either keyword argument `dtype` or `arr`: a numpy dtype or a numpy array.")

    if dtype is None:
        dtype = arr.dtype

    #1) Make a single-entry numpy array of the same dtype
    #2) force the array into a python 'object' dtype
    #3) the array entry should now be the closest python type
    single_entry = np.empty([1], dtype=dtype).astype(object)

    return type(single_entry[0])

Usage:

>>> type_np2py(int)
<class 'int'>

>>> type_np2py(np.int)
<class 'int'>

>>> type_np2py(str)
<class 'str'>

>>> type_np2py(arr=np.array(['hello']))
<class 'str'>

>>> type_np2py(arr=np.array([1,2,3]))
<class 'int'>

>>> type_np2py(arr=np.array([1.,2.,3.]))
<class 'float'>
Answered By: Simon Streicher

A side note about array scalars for those who don’t need automatic conversion and know the numpy dtype of the value:

Array scalars differ from Python scalars, but for the most part they can be used interchangeably (the primary exception is for versions of Python older than v2.x, where integer array scalars cannot act as indices for lists and tuples). There are some exceptions, such as when code requires very specific attributes of a scalar or when it checks specifically whether a value is a Python scalar. Generally, problems are easily fixed by explicitly converting array scalars to Python scalars, using the corresponding Python type function (e.g., int, float, complex, str, unicode).

Source

Thus, for most cases conversion might not be needed at all, and the array scalar could be used directly. The effect should be identical to using Python scalar:

>>> np.issubdtype(np.int64, int)
True
>>> np.int64(0) == 0
True
>>> np.issubdtype(np.float64, float)
True
>>> np.float64(1.1) == 1.1
True

But if, for some reason, the explicit conversion is needed, using the corresponding Python built-in function is the way to go. As shown in the other answer it’s also faster than array scalar item() method.

Answered By: wombatonfire

If you have an array list_numpy_numbers of numpy types, do the following:

list_native_numbers = [i.item() for i in list_numpy_numbers]
Answered By: mmdfl
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