How to select menu in pyvis network? Question: I want to visualize network with selection different nodes. For better understanding the problem attached this code. from pyvis.network import Network G = nx.Graph() rels = [ ["Fred", "George"], ["Harry", "Rita"], ["Fred", "Ginny"], ["Tom", "Ginny"], ["Harry", "Ginny"], ["Harry", "George"], ["Frank", "Ginny"], ["Marge", "Rita"], ["Fred", "Rita"] ] G.add_edges_from(rels) …
Check graph equality using networkx isomorphic Question: I have two graphs as follows import networkx as nx G1, G2 = nx.DiGraph(), nx.DiGraph() G1.add_edges_from([("s1", "s2"), ("s2", "s3"), ("s3", "s4")]) # G1: 1->2->3->4 G2.add_edges_from([("s1", "s2"), ("s2", "s3"), ("s3", "s7")]) # G2: 1->2->3->7 nx.is_isomorphic(G1, G2) By definition, we know the above two graphs are isomorphic, so is_isomorphic returns …
Reduce edges in a MultiDiGraph Question: I’ve a MultiDiGraph in which there are some edges that I need remove. import networkx as ntx import matplotlib.pyplot as plt edges = [ (6, 7), (7, 6), (7, 11), (11, 7), (11, 8), (8, 11), (8, 9), (9, 8), (9, 5), (5, 9), (5, 10), (10, 5), (10, …
Can the transparency of the link be specified in the list? Question: Abstract I am trying to find a way to make the nodes transparent. In the simple case, the transparency of a node is simply specified by the "alpha" option of "nx.draw". However, I thought I could specify the transparency with a list, just …
How to label edges and avoid the edge overlapping in MultiDiGraph/DiGraph? (Networkx) Question: Here is my code now G = nx.from_pandas_edgelist(data, source=’grad’, target=’to’, edge_attr=’count’, create_using=nx.DiGraph()) weight = nx.get_edge_attributes(G, ‘count’) pos = nx.shell_layout(G, scale=1) nx.draw_networkx_nodes(G, pos, node_size=300, node_color=’lightblue’) nx.draw_networkx_labels(G, pos=pos, font_color=’red’) nx.draw_networkx_edges(G, pos=pos, edgelist=G.edges(), edge_color=’black’, connectionstyle=’arc3, rad = 0.1′) nx.draw_networkx_edge_labels(G, pos=pos, edge_labels=weight) plt.show() and the Result …
networkx directed graph can't add weight in the middle of the edges from pandas df Question: My dataframe columns are A,B,Weight. Around 50 rows Here is my code G = nx.from_pandas_edgelist(df, source=’A’, target=’B’, create_using=nx.DiGraph()) weight = nx.get_edge_attributes(G, ‘Weight’) pos = nx.circular_layout(G, scale=1) nx.draw(G, pos, with_labels=True) nx.draw_networkx_nodes(G, pos, node_size=300) nx.draw_networkx_edges(G, pos=pos, edgelist=G.edges(), edge_color=’black’) nx.draw_networkx_labels(G, pos=pos, edge_labels=weight) …
Networkx KeyError: 'source' with from_pandas_edgelist for undirected edgelist Question: I have an edgelist in a pandas dataframe that looks like this: topic neighbor 0 K Kl 1 K Pr 2 Kl TS 3 Pr Kl 4 Pr Pr When I turn this into a Graph (using networkx as nx) with G = nx.from_pandas_edgelist(df) it gives …
Combining list of lists based on value in python Question: The topic was raised due to dealing with some graph problems. So I’m receiving information about graph structure via stdin and input looks like this: Number of Edges ID of NodeN1 Id of NodeN2 ID of NodeN3 Id of NodeN4 ID of NodeN5 Id of …
Draw specific edges in graph in NetworkX Question: I have a graph looking like this: By default, drawing the graph will include all nodes and edges, but I need to draw some specific edges using an array of connected nodes like this: [ [‘A’, ‘C’, ‘B’, ‘A’], [‘A’, ‘E’, ‘D’, ‘F’, ‘A’], [‘A’, ‘H’, ‘G’, …
Adding weighted directed edges to the networkx plot with an arrow from source to destination Question: import networkx as nx import numpy as np import matplotlib.pyplot as plt import pylab plt.rcParams[‘figure.figsize’] = [10, 10] G = nx.DiGraph() G.add_edges_from([(‘A’, ‘B’),(‘C’,’D’),(‘G’,’D’)], weight=1) G.add_edges_from([(‘D’,’A’),(‘D’,’E’),(‘B’,’D’),(‘D’,’E’)], weight=2) G.add_edges_from([(‘B’,’C’),(‘E’,’F’)], weight=3) G.add_edges_from([(‘C’,’F’)], weight=4) nodeopt = { ‘node_color’: ‘white’, ‘node_size’: 3500, ‘node_shape’: ‘o’, …
